C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high density lipoprotein binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453141 HDLBP-033 ENSG00000115677 9606 - 2:241252965-241262862 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000473 CIL_000473_0001 CGP 2:241188509-241317061
CIL_0002JH CIL_0002JH_0001 CGP 2:241227264-241354027

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186164 Hdlbp-004 protein_coding Mus_musculus 0 784
ENSMUST00000189951 Hdlbp-002 retained_intron Mus_musculus 0 780
ENSMUST00000042498 Hdlbp-003 protein_coding Mus_musculus 0 780
ENSMUST00000170883 Hdlbp-001 protein_coding Mus_musculus 0 780
ENSMUST00000190321 Hdlbp-007 protein_coding Mus_musculus 0 496
ENSMUST00000188988 Hdlbp-010 protein_coding Mus_musculus 0 315
ENSMUST00000186787 Hdlbp-008 protein_coding Mus_musculus 1e-36 158
ENSMUST00000189025 Hdlbp-006 protein_coding Mus_musculus 6e-25 119

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