C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein kinase C and casein kinase substrate in neurons 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453643 PACSIN2-007 ENSG00000100266 9606 - 22:42890935-43015135 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040L CIL_00040L_0001 CGP 22:42692121-42858106
CIL_0004U5 CIL_0004U5_0001 CGP 22:42796502-43015145
CIL_0008LG CIL_0008LG_0001 VISTA 22:42800321-43401810
CIL_0004LJ CIL_0004LJ_0001 CGP 22:42835412-43089428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0030036 IEA actin cytoskeleton organization
GO:0070836 IEA caveola assembly
GO:0097320 IEA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165095 Pacsin2-202 protein_coding Mus_musculus 0 625
ENSMUST00000171436 Pacsin2-203 protein_coding Mus_musculus 0 625
ENSMUST00000056177 Pacsin2-201 protein_coding Mus_musculus 0 623

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