C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM and cysteine-rich domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454244 LMCD1-002 ENSG00000071282 9606 + 3:8501858-8567621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENST00000454244
Transcript ID Brain Ovary Placenta Testis
ENST00000454244 0.483±0.00 7.424±0.00 12.943±0.00 3.225±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AB CIL_0003AB_0001 CGP 3:6770001-8568125
CIL_000001 CIL_000001_0001 CGP 3:8501707-8745040

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 ISS transcription corepressor activity
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010611 IMP regulation of cardiac muscle hypertrophy
GO:0031012 IDA extracellular matrix
GO:0070886 IMP positive regulation of calcineurin-NFAT signaling cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032376 Lmcd1-001 protein_coding Mus_musculus 0 1166

Loading