C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cullin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454323 CUL3-010 ENSG00000036257 9606 - 2:224473910-224495906 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonTestisENST00000454323
Transcript ID Adrenal Colon Testis
ENST00000454323 13.890±0.00 8.141±0.00 50.969±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XN CIL_0006XN_0001 CGP 2:224378698-224585397
CIL_0006XM CIL_0006XM_0001 CGP 2:224470150-225042445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164108 Cul3-002 protein_coding Mus_musculus 0 924
ENSMUST00000163119 Cul3-001 protein_coding Mus_musculus 0 924
ENSMUST00000168372 Cul3-005 protein_coding Mus_musculus 0 538
ENSMUST00000167794 Cul3-006 retained_intron Mus_musculus 0 287
ENSDART00000125379 protein_coding Danio_rerio 7e-38 161

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