C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124019-ENSG00000036257 CGP 9606 2:224378698-224585397
GeneTranscriptPositionBiotype
ENSG00000036257 (CUL3)
cullin 3 		ENST00000264414 (CUL3-001) 224470150-224585348 protein_coding
ENST00000344951 (CUL3-201) 224470150-224585397 protein_coding
ENST00000409096 (CUL3-002) 224473922-224569825 protein_coding
ENST00000409777 (CUL3-003) 224473939-224563299 protein_coding
ENST00000432260 (CUL3-013) 224513615-224557820 nonsense_mediated_decay
ENST00000436172 (CUL3-006) 224514636-224563320 protein_coding
ENST00000451538 (CUL3-011) 224474033-224497819 protein_coding
ENST00000454323 (CUL3-010) 224473910-224495906 nonsense_mediated_decay
ENST00000481135 (CUL3-009) 224502992-224504324 retained_intron
ENST00000484081 (CUL3-008) 224505749-224511411 retained_intron
ENST00000487558 (CUL3-004) 224495006-224500397 retained_intron
ENST00000497715 (CUL3-005) 224473902-224480124 retained_intron
ENST00000536702 (CUL3-015) 224478303-224485384 processed_transcript
ENST00000541548 (CUL3-014) 224511438-224533094 processed_transcript
ENST00000546102 (CUL3-012) 224535607-224560668 processed_transcript
ENST00000617432 (CUL3-202) 224473934-224505971 protein_coding
ENSG00000124019 (FAM124B)
family with sequence similarity 124B 		ENST00000243806 (FAM124B-001) 224399525-224402085 protein_coding
ENST00000389874 (FAM124B-002) 224378698-224401994 protein_coding
ENST00000409685 (FAM124B-003) 224378698-224402034 protein_coding
ENSG00000228446 (AC073052.1)
 ENST00000440417 (AC073052.1-001) 224499387-224500100 processed_pseudogene
CIL_0006XN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043230-ENSMUSG00000004364 CGP 10090 1:80198706-80340480
GeneTranscriptPositionBiotype
ENSMUSG00000004364 (Cul3)
cullin 3 		ENSMUST00000163119 (Cul3-001) 80264923-80340480 protein_coding
ENSMUST00000164108 (Cul3-002) 80266823-80340311 protein_coding
ENSMUST00000167293 (Cul3-004) 80288831-80340279 nonsense_mediated_decay
ENSMUST00000167794 (Cul3-006) 80267242-80276566 retained_intron
ENSMUST00000168372 (Cul3-005) 80266947-80277441 protein_coding
ENSMUST00000170897 (Cul3-003) 80287050-80340307 nonsense_mediated_decay
ENSMUSG00000043230 (Fam124b)
family with sequence similarity 124, member B 		ENSMUST00000058748 (Fam124b-001) 80198706-80213944 protein_coding
ENSMUST00000161427 (Fam124b-002) 80200325-80218473 processed_transcript
ENSMUSG00000101257 (RP23-269M3.3)
RIKEN cDNA 2310015K22 gene 		ENSMUST00000191452 (RP23-269M3.3-001) 80225044-80228792 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XN_0001ENSG00000036257ENST00000264414ENST00000344951ENST00000409096ENST00000409777ENST00000432260ENST00000436172ENST00000451538ENST00000454323ENST00000481135ENST00000484081ENST00000487558ENST00000497715ENST00000536702ENST00000541548ENST00000546102ENST00000617432ENSG00000124019ENST00000243806ENST00000389874ENST00000409685ENSG00000228446ENST00000440417CIL_0006XN_0002ENSMUSG00000004364ENSMUST00000163119ENSMUST00000164108ENSMUST00000167293ENSMUST00000167794ENSMUST00000168372ENSMUST00000170897ENSMUSG00000043230ENSMUST00000058748ENSMUST00000161427ENSMUSG00000101257ENSMUST00000191452
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XN_0001ENSG00000036257ENST00000264414ENST00000409096ENST00000454323ENST00000617432ENSG00000124019ENST00000243806ENST00000389874ENST00000409685ENSG00000228446ENST00000440417CIL_0006XN_0002ENSMUSG00000004364ENSMUST00000163119ENSMUST00000164108ENSMUSG00000043230ENSMUST00000058748ENSMUST00000161427ENSMUSG00000101257ENSMUST00000191452
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000036257 ENST00000264414 1.159±0.00 1.510±0.00 0.819±0.00 2.762±0.55 1.036±0.16 1.005±0.06 0.826±0.31 1.424±0.00 0.840±0.00 0.968±0.10 2.353±0.00 1.739±0.45 0.980±0.09 N/A
ENST00000344951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409096 12.673±0.00 N/A 2.445±0.00 8.343±3.16 8.841±2.93 2.163±0.00 8.229±4.97 9.683±5.68 5.971±1.03 6.911±2.23 24.106±0.00 14.325±10.24 5.114±2.19 203.452±0.00
ENST00000409777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454323 N/A 13.890±0.00 N/A N/A N/A 8.141±0.00 N/A N/A N/A N/A N/A N/A N/A 50.969±0.00
ENST00000481135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617432 5.653±0.00 10.295±0.00 8.572±0.00 10.825±2.93 6.749±0.39 6.429±0.17 5.600±1.39 11.289±2.55 8.757±0.70 9.128±1.04 15.248±6.24 12.002±0.84 7.118±0.20 43.450±0.00
ENSG00000124019 ENST00000243806 N/A 0.205±0.00 0.037±0.00 0.009±0.00 N/A N/A 0.197±0.00 N/A 0.115±0.00 0.132±0.00 N/A 0.133±0.08 N/A 0.067±0.00
ENST00000389874 1.580±0.00 N/A N/A N/A 0.525±0.00 0.352±0.33 0.093±0.00 0.122±0.00 N/A N/A N/A 0.086±0.03 1.063±0.18 0.095±0.07
ENST00000409685 0.964±0.00 0.664±0.00 N/A 0.084±0.03 0.715±0.01 0.372±0.35 0.300±0.01 0.292±0.17 0.291±0.16 0.733±0.45 0.404±0.03 0.280±0.16 0.551±0.30 0.109±0.09
ENSG00000228446 ENST00000440417 0.016±0.00 0.623±0.00 0.138±0.00 0.336±0.00 3.319±0.00 0.911±0.83 0.229±0.03 0.091±0.02 1.589±0.00 1.406±1.02 0.391±0.20 1.419±1.66 0.453±0.38 0.552±0.43
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004364 ENSMUST00000163119 4.411±0.86 4.250±1.39 5.851±1.81 8.913±1.29 3.268±0.77 2.546±0.97 5.413±0.92 2.712±0.59 3.506±1.61 4.285±0.13 14.826±6.28 4.119±1.74 5.340±0.60 6.455±0.86
ENSMUST00000164108 7.711±0.71 6.504±2.07 17.983±0.23 20.666±15.85 9.953±2.61 4.578±1.83 11.293±0.78 11.605±1.22 9.745±2.16 7.863±1.58 39.504±3.43 14.499±13.72 33.436±19.91 88.542±60.90
ENSMUST00000167293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043230 ENSMUST00000058748 0.264±0.14 0.032±0.00 0.021±0.01 0.060±0.05 0.171±0.07 0.065±0.02 0.330±0.10 0.039±0.01 0.006±0.00 1.382±0.59 0.129±0.06 0.234±0.12 0.264±0.18 1.068±0.06
ENSMUST00000161427 N/A N/A N/A N/A N/A N/A 0.125±0.00 0.061±0.00 N/A N/A 0.125±0.00 0.157±0.00 N/A 6.162±3.54
ENSMUSG00000101257 ENSMUST00000191452 N/A N/A 0.011±0.00 0.016±0.00 0.708±0.33 N/A 0.100±0.00 0.075±0.00 0.009±0.00 0.043±0.01 N/A 0.062±0.07 0.004±0.00 0.069±0.02

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