C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477208}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455236 RP1-37E16.12-001 ENSG00000100101 9606 + 22:37686414-37774130 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartMuscleENST00000455236
Transcript ID Bladder Heart Muscle
ENST00000455236 0.264±0.00 0.236±0.00 0.645±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040C CIL_00040C_0001 CGP 22:37675608-37693478
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_00040B CIL_00040B_0001 CGP 22:37686414-37776556

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109689 Triobp-002 protein_coding Mus_musculus 0 2433
ENSMUST00000109688 Triobp-201 protein_coding Mus_musculus 0 2080
ENSMUST00000109687 Triobp-005 protein_coding Mus_musculus 0 2080
ENSMUST00000109690 Triobp-001 protein_coding Mus_musculus 0 2078
ENSMUST00000140228 Triobp-003 processed_transcript Mus_musculus 0 1279
ENSMUST00000130663 Triobp-007 protein_coding Mus_musculus 0 946
ENSMUST00000138880 Nol12-001 protein_coding Mus_musculus 0 645
ENSMUST00000144151 Triobp-006 protein_coding Mus_musculus 0 444
ENSMUST00000149580 Nol12-005 protein_coding Mus_musculus 0 442
ENSMUST00000129922 Triobp-008 processed_transcript Mus_musculus 0 440
ENSMUST00000041164 Nol12-004 protein_coding Mus_musculus 0 250
ENSMUST00000145157 Nol12-002 protein_coding Mus_musculus 0 228
ENSMUST00000123013 Nol12-003 protein_coding Mus_musculus 5e-29 135

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