C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7-like 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455249 RPL7L1P3-001 ENSG00000235090 9606 + 7:75922755-75923443 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000455249
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000455249 0.020±0.00 0.190±0.00 0.956±0.00 0.154±0.00 0.773±0.75 0.670±0.00 0.133±0.00 0.379±0.00 0.362±0.14 0.947±0.00 0.589±0.00 0.128±0.03 0.092±0.02 0.124±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NP CIL_0006NP_0001 CGP 7:75842602-75986855
CIL_0006NS CIL_0006NS_0001 CGP 7:75899200-75994659

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 244
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 244
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 244
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000119005 Gm11222-001 processed_pseudogene Mus_musculus 0 207

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