| Transcript ID | Breast | Colon |
|---|---|---|
| ENST00000455798 | 0.712±0.00 | 0.968±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | TSEN34 tRNA splicing endonuclease subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000455798  |
TSEN34-006 |
ENSG00000170892 |
9606 | + |
19:54189938-54192355  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005M7 | CIL_0005M7_0001 | CGP | 19:54173412-54194536 |
| CIL_0005M6 | CIL_0005M6_0001 | CGP | 19:54189938-54249003 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000213 | IEA | tRNA-intron endonuclease activity |
| GO:0006388 | IEA | tRNA splicing, via endonucleolytic cleavage and ligation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000038521
|
Tsen34-002 | protein_coding | Mus_musculus | 0 | 699 |
|
ENSMUST00000155060
|
Tsen34-009 | nonsense_mediated_decay | Mus_musculus | 0 | 671 |
|
ENSMUST00000108627
|
Tsen34-004 | protein_coding | Mus_musculus | 0 | 667 |
|
ENSMUST00000108629
|
Tsen34-003 | protein_coding | Mus_musculus | 0 | 665 |
|
ENSMUST00000108630
|
Tsen34-001 | protein_coding | Mus_musculus | 0 | 665 |
|
ENSMUST00000142461
|
4930526A20Rik-002 | processed_transcript | Mus_musculus | 0 | 638 |
|
ENSMUST00000134228
|
4930526A20Rik-001 | transcribed_processed_pseudogene | Mus_musculus | 0 | 632 |
|
ENSMUST00000142713
|
Tsen34-007 | protein_coding | Mus_musculus | 0 | 451 |
|
ENSMUST00000123088
|
Tsen34-006 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000137204
|
Tsen34-008 | protein_coding | Mus_musculus | 0 | 390 |
