C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermine oxidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457205 SMOX-004 ENSG00000088826 9606 + 20:4177572-4187747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000457205
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000457205 1.241±0.00 0.863±0.00 0.171±0.00 0.762±0.00 0.611±0.00 1.011±0.00 0.132±0.00 0.295±0.04 0.620±0.52 2.673±0.00 3.024±1.99 2.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068E CIL_00068E_0002 CGP 20:3927309-4187747
CIL_00037W CIL_00037W_0001 CGP 20:4120980-4249074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110186 Smox-008 protein_coding Mus_musculus 0 1688
ENSMUST00000028806 Smox-001 protein_coding Mus_musculus 0 1360
ENSMUST00000110188 Smox-011 protein_coding Mus_musculus 0 1146
ENSMUST00000110189 Smox-005 protein_coding Mus_musculus 0 1144
ENSMUST00000151627 Smox-004 retained_intron Mus_musculus 0 1114
ENSMUST00000110181 Smox-010 protein_coding Mus_musculus 0 532
ENSMUST00000110180 Smox-009 protein_coding Mus_musculus 0 520
ENSMUST00000183881 Smox-016 nonsense_mediated_decay Mus_musculus 0 499
ENSMUST00000183575 Smox-013 nonsense_mediated_decay Mus_musculus 0 254
ENSMUST00000110179 Smox-003 protein_coding Mus_musculus 0 252
ENSMUST00000110183 Smox-007 protein_coding Mus_musculus 0 250
ENSMUST00000183947 Smox-002 nonsense_mediated_decay Mus_musculus 0 250
ENSMUST00000110182 Smox-006 protein_coding Mus_musculus 0 241
ENSMUST00000151143 Smox-017 retained_intron Mus_musculus 0 239

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