C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermine oxidase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000088826 SMOX 9606 + 20:4120980-4187747 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278795 SMOX-011 4148779-4187747 protein_coding
  ENST00000305958 SMOX-005 4148779-4187747 protein_coding
  ENST00000339123 SMOX-001 4148779-4187747 protein_coding
  ENST00000346595 SMOX-010 4148935-4187747 protein_coding
  ENST00000379460 SMOX-008 4171710-4187747 protein_coding
  ENST00000457205 SMOX-004 4177572-4187747 protein_coding
  ENST00000466004 SMOX-003 4183259-4183654 processed_transcript
  ENST00000484515 SMOX-009 4148831-4181976 processed_transcript
  ENST00000486998 SMOX-002 4183209-4187747 processed_transcript
  ENST00000493223 SMOX-006 4120980-4175104 processed_transcript
  ENST00000494098 SMOX-007 4181894-4187747 processed_transcript
  ENST00000621355 SMOX-201 4148779-4187746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305958ENST00000339123ENST00000346595ENST00000379460ENST00000457205ENST00000466004ENST00000484515ENST00000486998
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305958 3.588±0.00 N/A N/A 16.451±14.73 0.637±0.00 3.469±0.00 0.303±0.00 2.796±0.00 0.711±0.00 2.127±0.00 N/A 5.681±3.65 5.300±2.97 8.323±0.00
ENST00000339123 N/A N/A N/A N/A 0.336±0.00 0.088±0.00 0.660±0.00 N/A 0.203±0.00 2.170±0.00 0.452±0.00 N/A 4.192±0.00 N/A
ENST00000346595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.831±3.26 8.391±0.00 N/A
ENST00000379460 N/A N/A N/A N/A N/A 0.378±0.00 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000457205 1.241±0.00 0.863±0.00 0.171±0.00 0.762±0.00 0.611±0.00 1.011±0.00 N/A 0.132±0.00 0.295±0.04 N/A 0.620±0.52 2.673±0.00 3.024±1.99 2.274±0.00
ENST00000466004 N/A N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484515 N/A N/A N/A N/A 0.213±0.00 N/A N/A 1.244±0.00 0.280±0.00 N/A N/A N/A N/A N/A
ENST00000486998 N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068E CIL_00068E_0002 CGP 20:3927309-4187747
CIL_00037W CIL_00037W_0001 CGP 20:4120980-4249074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006595 TAS polyamine metabolic process
GO:0006596 TAS polyamine biosynthetic process
GO:0006598 IDA polyamine catabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046208 IEA spermine catabolic process
GO:0046592 IDA polyamine oxidase activity
GO:0052894 IEA norspermine:oxygen oxidoreductase activity
GO:0052895 IEA N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity
GO:0052901 IEA spermine:oxygen oxidoreductase (spermidine-forming) activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036967 smox spermine oxidase protein_coding Danio_rerio
ENSMUSG00000027333 Smox spermine oxidase protein_coding Mus_musculus

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