C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-related transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457354 TMX1-001 ENSG00000139921 9606 + 14:51240168-51257546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000457354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000457354 5.013±0.00 5.685±0.00 0.411±0.00 1.778±0.25 3.521±1.01 4.685±0.18 1.044±0.31 2.097±0.09 2.134±0.08 3.722±0.60 1.259±0.88 3.827±0.74 4.713±1.00 1.950±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069N CIL_00069N_0002 CGP 14:50975262-51257546
CIL_00069M CIL_00069M_0002 CGP 14:51240162-51730727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005730 IDA nucleolus
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006457 IBA protein folding
GO:0015036 IDA disulfide oxidoreductase activity
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021471 Tmx1-001 protein_coding Mus_musculus 0 878
ENSMUST00000162277 Tmx1-002 nonsense_mediated_decay Mus_musculus 0 353

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