C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Sec61 gamma subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460484 SEC61G-003 ENSG00000132432 9606 - 7:54754792-54759198 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungENST00000460484
Transcript ID Bladder Colon Lung
ENST00000460484 0.221±0.00 1.093±0.00 1.902±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LU CIL_0006LU_0001 CGP 7:54542325-54759974
CIL_000647 CIL_000647_0001 CGP 7:54752250-55256620

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160052 Gm10177-002 processed_transcript Mus_musculus 0 285
ENSMUST00000178855 Sec61g-202 protein_coding Mus_musculus 0 285
ENSMUST00000166950 Sec61g-201 protein_coding Mus_musculus 0 285
ENSMUST00000109641 Sec61g-002 protein_coding Mus_musculus 0 285
ENSMUST00000109642 Sec61g-005 protein_coding Mus_musculus 0 285
ENSMUST00000109643 Sec61g-001 protein_coding Mus_musculus 0 285
ENSMUST00000161698 Gm10177-001 transcribed_processed_pseudogene Mus_musculus 0 283
ENSMUST00000121602 Gm16412-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000122243 Gm11575-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000119635 Gm15266-001 unprocessed_pseudogene Mus_musculus 0 261
ENSMUST00000121191 Gm12881-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000120497 Gm14989-001 processed_pseudogene Mus_musculus 0 244

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