C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chordin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460627 CHRD-005 ENSG00000090539 9606 + 3:184380073-184389829 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartLungOvaryTestisENST00000460627
Transcript ID Adipose Adrenal Brain Heart Lung Ovary Testis
ENST00000460627 0.319±0.00 0.973±0.00 1.236±0.00 0.175±0.00 0.786±0.00 1.256±0.20 0.129±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_00056V CIL_00056V_0001 CGP 3:184371935-184390736

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153299 Chrd-003 nonsense_mediated_decay Mus_musculus 0 1027
ENSMUST00000007171 Chrd-001 protein_coding Mus_musculus 0 1027
ENSMUST00000115423 Chrd-002 protein_coding Mus_musculus 0 802
ENSMUST00000151150 Chrd-004 retained_intron Mus_musculus 0 462

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