C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22 (organic cation/carnitine transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461013 SLC22A5-006 ENSG00000197375 9606 + 5:132376086-132395611 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverPlacentaENST00000461013
Transcript ID Bladder Brain Breast Colon Heart Liver Placenta
ENST00000461013 1.790±0.00 0.290±0.00 0.551±0.00 0.202±0.00 0.268±0.15 0.189±0.08 0.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227
CIL_0000HR CIL_0000HR_0002 CGP 5:132294443-132395614

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019044 Slc22a5-001 protein_coding Mus_musculus 0 1310
ENSMUST00000076493 Slc22a21-001 protein_coding Mus_musculus 0 941
ENSMUST00000152084 Slc22a5-003 nonsense_mediated_decay Mus_musculus 0 466

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