C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: troponin C type 1 (slow)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461086 TNNC1-004 ENSG00000114854 9606 - 3:52451439-52451991 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverENST00000461086
Transcript ID Bladder Brain Liver
ENST00000461086 0.979±0.00 0.145±0.00 1.393±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169169 Tnnc1-001 protein_coding Mus_musculus 0 268
ENSMUST00000170268 Tnnc1-003 nonsense_mediated_decay Mus_musculus 1.99993e-41 172
ENSMUST00000161399 Tnnc1-002 retained_intron Mus_musculus 4.99997e-41 171

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