C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin C, cardiac/slow skeletal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170268 Tnnc1-003 ENSMUSG00000091898 10090 + 14:31208330-31211636 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverOvaryPlacentaENSMUST00000170268
Transcript ID Brain Kidney Liver Ovary Placenta
ENSMUST00000170268 4.767±0.00 0.161±0.00 0.169±0.05 0.995±0.51 16.000±14.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_00002S CIL_00002S_0002 CGP 14:31139013-31216946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232975 TNNC1-001 protein_coding Homo_sapiens 0 547
ENST00000461086 TNNC1-004 retained_intron Homo_sapiens 1.99993e-41 172
ENST00000496590 TNNC1-002 protein_coding Homo_sapiens 0 412

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