C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin C, cardiac/slow skeletal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161399 Tnnc1-002 ENSMUSG00000091898 10090 + 14:31208332-31210998 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyOvaryPlacentaTestisENSMUST00000161399
Transcript ID Bladder Breast Kidney Ovary Placenta Testis
ENSMUST00000161399 0.618±0.07 0.363±0.00 0.171±0.03 0.732±0.30 0.396±0.00 0.285±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_00002S CIL_00002S_0002 CGP 14:31139013-31216946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232975 TNNC1-001 protein_coding Homo_sapiens 0 464
ENST00000461086 TNNC1-004 retained_intron Homo_sapiens 4.99997e-41 171
ENST00000496590 TNNC1-002 protein_coding Homo_sapiens 0 411

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