C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily H (eag-related), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461280 KCNH2-008 ENSG00000055118 9606 - 7:150949423-150955810 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000461280
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000461280 0.321±0.00 2.885±0.00 2.682±0.00 0.192±0.00 5.398±4.95 0.490±0.00 0.787±0.00 1.263±0.00 2.283±2.45 0.355±0.00 5.387±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004OG CIL_0004OG_0001 CGP 7:150944961-151014588

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115098 Kcnh2-002 protein_coding Mus_musculus 0 2143
ENSMUST00000036092 Kcnh2-001 protein_coding Mus_musculus 0 1736
ENSMUST00000145539 Kcnh6-004 nonsense_mediated_decay Mus_musculus 0 1192
ENSMUST00000001965 Kcnh6-001 protein_coding Mus_musculus 0 1192
ENSDART00000090809 kcnh6-201 protein_coding Danio_rerio 0 863
ENSDART00000134201 kcnh6-001 protein_coding Danio_rerio 0 863
ENSMUST00000142197 Kcnh2-004 processed_transcript Mus_musculus 0 784
ENSMUST00000106903 Kcnh6-002 protein_coding Mus_musculus 0 617
ENSDART00000084238 KCNH7 (4 of 6)-201 protein_coding Danio_rerio 0 568
ENSMUST00000126791 Kcnh2-003 processed_transcript Mus_musculus 0 435

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