C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: interferon regulatory factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461416 IRF5-006 ENSG00000128604 9606 + 7:128937981-128947745 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonENST00000461416
Transcript ID Brain Breast Colon
ENST00000461416 0.109±0.00 0.861±0.00 0.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YB CIL_0001YB_0001 CGP 7:128937612-129055144

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004392 Irf5-001 protein_coding Mus_musculus 0 575
ENSMUST00000163511 Irf5-003 protein_coding Mus_musculus 0 542
ENSMUST00000164922 Irf5-006 processed_transcript Mus_musculus 0 331
ENSMUST00000164626 Irf5-002 protein_coding Mus_musculus 0 292
ENSMUST00000140066 Irf6-002 retained_intron Mus_musculus 0.00000000000002 84
ENSMUST00000138826 Irf6-004 retained_intron Mus_musculus 0.00000000000002 84
ENSMUST00000076521 Irf6-001 protein_coding Mus_musculus 0.00000000000002 84

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