C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: fragile X mental retardation, autosomal homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461801 FXR1-020 ENSG00000114416 9606 + 3:180933036-180935196 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081N CIL_00081N_0001 VISTA 3:180418639-181020170
CIL_00081O CIL_00081O_0001 VISTA 3:180444037-181045086
CIL_0001FQ CIL_0001FQ_0001 CGP 3:180602130-180871005
CIL_0001FR CIL_0001FR_0001 CGP 3:180602858-180982753
CIL_0007MF CIL_0007MF_0001 UCNEbase 3:180719005-182597004
CIL_0008UV CIL_0008UV_0001 VISTA 3:180755851-181358014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001620 Fxr1-201 protein_coding Mus_musculus 3.9937e-43 178
ENSMUST00000167354 Fxr1-202 protein_coding Mus_musculus 3.9937e-43 178

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