C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleic acid binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462712 NABP1-008 ENSG00000173559 9606 + 2:191678136-191683135 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryENST00000462712
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary
ENST00000462712 3.435±0.00 0.608±0.00 7.274±0.00 3.271±0.00 2.723±0.00 4.845±0.00 9.053±0.00 0.674±0.00 7.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042N CIL_00042N_0002 CGP 2:191678068-191847255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185534 Nabp1-008 protein_coding Mus_musculus 0 350
ENSMUST00000188051 Nabp1-007 protein_coding Mus_musculus 0 318
ENSMUST00000188204 Nabp1-009 protein_coding Mus_musculus 0 318
ENSMUST00000186684 Nabp1-005 protein_coding Mus_musculus 0 318
ENSMUST00000027279 Nabp1-001 protein_coding Mus_musculus 0 318
ENSMUST00000190103 Nabp1-002 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000186003 Nabp1-006 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000189542 Nabp1-003 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000188303 Nabp1-004 retained_intron Mus_musculus 0 213

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