C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sec1 family domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463622 SCFD1-008 ENSG00000092108 9606 + 14:30622319-30735692 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLungMuscleENST00000463622
Transcript ID Adipose Adrenal Brain Breast Heart Lung Muscle
ENST00000463622 1.349±0.00 3.420±0.00 4.570±0.00 2.775±0.00 1.732±0.00 1.301±0.00 2.297±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000893 CIL_000893_0001 VISTA 14:30219860-30821737
CIL_0003SX CIL_0003SX_0001 CGP 14:30559123-30735812
CIL_0007KV CIL_0007KV_0002 UCNEbase 14:30606668-30894124
CIL_0003T0 CIL_0003T0_0001 CGP 14:30622112-30895065

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021335 Scfd1-201 protein_coding Mus_musculus 0 2322

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