C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463655 CTC-209L16.1-001 ENSG00000241187 9606 + 5:154729231-154729694 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000463655
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000463655 0.147±0.00 0.278±0.00 0.384±0.36 0.070±0.00 0.299±0.00 1.092±1.07 0.119±0.00 0.661±0.00 0.458±0.42 0.041±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099I CIL_00099I_0001 VISTA 5:154192067-154792416
CIL_00088D CIL_00088D_0001 VISTA 5:154298500-154906275
CIL_00023W CIL_00023W_0001 CGP 5:154474972-154817607

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000079153 Gm8526-201 processed_pseudogene Mus_musculus 0 261
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 3e-25 119

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