C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463854 STAM2-002 ENSG00000115145 9606 - 2:152131882-152175749 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonOvaryENST00000463854
Transcript ID Bladder Brain Colon Ovary
ENST00000463854 3.855±0.00 2.443±0.00 3.499±0.00 4.800±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E3 CIL_0007E3_0001 CGP 2:151832776-152175992
CIL_0007E6 CIL_0007E6_0001 CGP 2:152116801-152649834

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102759 Stam2-001 protein_coding Mus_musculus 0 1256
ENSMUST00000150582 Stam2-003 retained_intron Mus_musculus 0 948
ENSMUST00000127316 Stam2-002 protein_coding Mus_musculus 0 843
ENSMUST00000155516 Stam2-005 nonsense_mediated_decay Mus_musculus 0 802
ENSMUST00000138290 Stam2-004 protein_coding Mus_musculus 0 327

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