C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12 pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464109 RPS12P20-001 ENSG00000244134 9606 + 11:72708186-72708565 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungOvaryTestisENST00000464109
Transcript ID Adrenal Brain Breast Colon Heart Lung Ovary Testis
ENST00000464109 0.052±0.00 0.057±0.00 1.215±0.00 0.163±0.00 0.147±0.00 0.206±0.00 0.244±0.00 0.515±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 1.00053e-42 176
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 5.99994e-41 171
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 5.99994e-41 171
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 5.99994e-41 171
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 1e-37 159
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 2e-31 139
ENSMUST00000179356 Rps12-ps14-001 processed_pseudogene Mus_musculus 3e-29 132
ENSMUST00000178365 Rps12-ps13-001 processed_pseudogene Mus_musculus 3e-29 132
ENSMUST00000179567 Rps12-ps15-001 processed_pseudogene Mus_musculus 3e-29 132
ENSMUST00000179020 Rps12-ps12-001 processed_pseudogene Mus_musculus 3e-29 132
ENSMUST00000178427 Rps12-ps11-001 processed_pseudogene Mus_musculus 3e-29 132
ENSMUST00000178172 Rps12-ps21-001 processed_pseudogene Mus_musculus 1e-28 130
ENSMUST00000118529 Rps12-ps16-001 processed_pseudogene Mus_musculus 1e-27 126
ENSMUST00000121168 Rps12-ps20-001 processed_pseudogene Mus_musculus 5e-27 124
ENSMUST00000179067 Rps12-ps17-001 processed_pseudogene Mus_musculus 6e-26 121
ENSMUST00000179420 Rps12-ps18-001 processed_pseudogene Mus_musculus 6e-26 121
ENSMUST00000179239 Rps12-ps6-001 processed_pseudogene Mus_musculus 6e-26 121
ENSMUST00000179414 Rps12-ps23-001 processed_pseudogene Mus_musculus 2e-25 119
ENSMUST00000179382 Rps12-ps22-001 processed_pseudogene Mus_musculus 2e-25 119
ENSMUST00000182321 Rps12l2-001 processed_pseudogene Mus_musculus 4e-23 111
ENSMUST00000117751 Rps12-ps26-001 processed_pseudogene Mus_musculus 1e-17 94

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