C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nischarin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464280 NISCH-007 ENSG00000010322 9606 + 3:52475616-52478583 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000464280
Transcript ID Muscle
ENST00000464280 1.907±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165981 Nisch-002 protein_coding Mus_musculus 0 544
ENSMUST00000172142 Nisch-001 protein_coding Mus_musculus 0 538
ENSMUST00000022469 Nisch-004 protein_coding Mus_musculus 0 538
ENSMUST00000168206 Nisch-005 protein_coding Mus_musculus 0 538
ENSMUST00000169149 Nisch-021 nonsense_mediated_decay Mus_musculus 0 394
ENSMUST00000164989 Nisch-006 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000172370 Nisch-011 retained_intron Mus_musculus 4.00001e-41 172

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