C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | nischarin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000164989  |
Nisch-006 |
ENSMUSG00000021910 |
10090 | - |
14:31185726-31206700  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007WP | CIL_0007WP_0002 | VISTA | 14:30932335-31535522 |
| CIL_00002S | CIL_00002S_0002 | CGP | 14:31139013-31216946 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005178 | IDA | integrin binding |
| GO:0005768 | IEA | endosome |
| GO:0005829 | IDA | cytosol |
| GO:0006915 | IEA | apoptotic process |
| GO:0016601 | IDA | Rac protein signal transduction |
| GO:0030036 | IDA | actin cytoskeleton organization |
| GO:0030336 | IDA | negative regulation of cell migration |
| GO:0035091 | IEA | phosphatidylinositol binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000345716
|
NISCH-201 | protein_coding | Homo_sapiens | 0 | 1059 |
|
ENST00000420808
|
NISCH-014 | protein_coding | Homo_sapiens | 0 | 1040 |
|
ENST00000464280
|
NISCH-007 | processed_transcript | Homo_sapiens | 0 | 261 |
|
ENST00000479054
|
NISCH-001 | protein_coding | Homo_sapiens | 0 | 1059 |
|
ENST00000481211
|
NISCH-008 | retained_intron | Homo_sapiens | 0 | 263 |
|
ENST00000488157
|
NISCH-005 | processed_transcript | Homo_sapiens | 0 | 255 |
|
ENST00000488380
|
NISCH-004 | protein_coding | Homo_sapiens | 0 | 1040 |
|
ENST00000489895
|
NISCH-003 | retained_intron | Homo_sapiens | 0 | 852 |
|
ENST00000490425
|
NISCH-006 | processed_transcript | Homo_sapiens | 0 | 505 |
