C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chordin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464833 CHRD-015 ENSG00000090539 9606 + 3:184384788-184387401 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartOvaryENST00000464833
Transcript ID Bladder Brain Heart Ovary
ENST00000464833 0.904±0.00 3.626±0.00 0.429±0.00 0.549±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_00056V CIL_00056V_0001 CGP 3:184371935-184390736

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153299 Chrd-003 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000007171 Chrd-001 protein_coding Mus_musculus 0 374
ENSMUST00000151150 Chrd-004 retained_intron Mus_musculus 0 279
ENSMUST00000115423 Chrd-002 protein_coding Mus_musculus 0 267

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