C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465776 RP11-200A13.2-001 ENSG00000240271 9606 + 8:105011107-105011568 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungMuscleOvaryTestisENST00000465776
Transcript ID Brain Colon Liver Lung Muscle Ovary Testis
ENST00000465776 0.044±0.00 0.117±0.00 0.070±0.00 0.039±0.00 0.476±0.37 0.063±0.00 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OF CIL_0007OF_0001 UCNEbase 8:104531728-105804547
CIL_0008AI CIL_0008AI_0001 VISTA 8:104568632-105169919
CIL_00060E CIL_00060E_0001 CGP 8:104590733-106752694
CIL_0008B6 CIL_0008B6_0001 VISTA 8:104649296-105251466
CIL_0008OP CIL_0008OP_0001 VISTA 8:104789695-105391207

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077493 Gm8412-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000116110 Gm11799-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000121617 Gm12340-001 unprocessed_pseudogene Mus_musculus 0 267
ENSMUST00000120590 Gm13740-001 processed_pseudogene Mus_musculus 2e-22 110

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