C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466073 TFAP2A-010 ENSG00000137203 9606 - 6:10398602-10414985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonOvaryPlacentaENST00000466073
Transcript ID Adipose Colon Ovary Placenta
ENST00000466073 0.318±0.00 0.509±0.00 9.731±0.00 23.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NC CIL_0007NC_0001 UCNEbase 6:8153140-10408054
CIL_00097A CIL_00097A_0001 VISTA 6:10093642-10694839
CIL_00086X CIL_00086X_0001 VISTA 6:10107199-10709812
CIL_000382 CIL_000382_0001 CGP 6:10393186-10629368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005813 IDA centrosome
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110193 Tfap2a-202 protein_coding Mus_musculus 0 1334
ENSMUST00000021787 Tfap2a-201 protein_coding Mus_musculus 0 1264

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