C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rap guanine nucleotide exchange factor (GEF) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466322 RAPGEF3-012 ENSG00000079337 9606 - 12:47749953-47758438 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YT CIL_0005YT_0001 CGP 12:47709734-47771040
CIL_0002OC CIL_0002OC_0001 CGP 12:47734672-47782753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123397 Rapgef3-004 retained_intron Mus_musculus 0 773
ENSMUST00000177352 Rapgef3-007 protein_coding Mus_musculus 0 773
ENSMUST00000128775 Rapgef3-003 protein_coding Mus_musculus 0 773
ENSMUST00000129223 Rapgef3-001 protein_coding Mus_musculus 0 773
ENSMUST00000126854 Rapgef3-005 protein_coding Mus_musculus 0 773
ENSMUST00000149419 Rapgef3-009 nonsense_mediated_decay Mus_musculus 0 719
ENSMUST00000146620 Rapgef3-008 protein_coding Mus_musculus 0 562
ENSMUST00000153464 Rapgef3-010 processed_transcript Mus_musculus 0 553
ENSMUST00000142196 Rapgef3-011 retained_intron Mus_musculus 0 353

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