C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group I, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466380 NR1I2-003 ENSG00000144852 9606 + 3:119780484-119818485 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000466380
Transcript ID Bladder
ENST00000466380 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BS CIL_0005BS_0002 CGP 3:119703022-119818485
CIL_0005BP CIL_0005BP_0002 CGP 3:119780484-120094417

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004887 IEA thyroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0030522 IEA intracellular receptor signaling pathway
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023504 Nr1i2-001 protein_coding Mus_musculus 0 662
ENSDART00000061525 nr1i2-202 protein_coding Danio_rerio 1e-22 113
ENSDART00000123247 nr1i2-203 protein_coding Danio_rerio 1e-22 113
ENSDART00000017326 nr1i2-201 protein_coding Danio_rerio 1e-22 113
ENSDART00000125174 nr1i2-001 protein_coding Danio_rerio 1e-22 113

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