C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005BP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029766-ENSDARG00000017803 CGP 7955 9:9724022-9892656
GeneTranscriptPositionBiotype
ENSDARG00000017803 (gsk3b)
glycogen synthase kinase 3 beta 		ENSDART00000018228 (gsk3b-001) 9799155-9892656 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005BP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144852-ENSG00000082701 CGP 9606 3:119780484-120094417
GeneTranscriptPositionBiotype
ENSG00000082701 (GSK3B)
glycogen synthase kinase 3 beta 		ENST00000264235 (GSK3B-001) 119821323-120094417 protein_coding
ENST00000316626 (GSK3B-002) 119826686-120093666 protein_coding
ENST00000473886 (GSK3B-004) 119826701-119876508 processed_transcript
ENST00000474830 (GSK3B-003) 119826693-119843609 retained_intron
ENSG00000144852 (NR1I2)
nuclear receptor subfamily 1, group I, member 2 		ENST00000337940 (NR1I2-001) 119782710-119818485 protein_coding
ENST00000393716 (NR1I2-002) 119780484-119818485 protein_coding
ENST00000466380 (NR1I2-003) 119780484-119818485 protein_coding
ENST00000474090 (NR1I2-004) 119782035-119810552 retained_intron
ENST00000493757 (NR1I2-005) 119811076-119818484 retained_intron
ENSG00000239835 (RP11-767L7.1)
 ENST00000482027 (RP11-767L7.1-001) 120028740-120029868 processed_pseudogene
ENSG00000240471 (PHBP8)
prohibitin pseudogene 8 		ENST00000493810 (PHBP8-001) 119791829-119792553 processed_pseudogene
ENSG00000241546 (RP11-767L7.2)
 ENST00000491262 (RP11-767L7.2-001) 120041190-120041537 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BP_0001ENSDARG00000017803ENSDART00000018228CIL_0005BP_0002ENSG00000082701ENST00000264235ENST00000316626ENST00000473886ENST00000474830ENSG00000144852ENST00000337940ENST00000393716ENST00000466380ENST00000474090ENST00000493757ENSG00000239835ENST00000482027ENSG00000240471ENST00000493810ENSG00000241546ENST00000491262
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BP_0001ENSDARG00000017803ENSDART00000018228CIL_0005BP_0002ENSG00000082701ENST00000264235ENST00000316626ENST00000473886ENSG00000144852ENST00000337940ENST00000393716ENST00000466380ENST00000474090ENST00000493757ENSG00000239835ENST00000482027ENSG00000240471ENST00000493810ENSG00000241546ENST00000491262
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017803 ENSDART00000018228 N/A N/A N/A 20.739±7.77 N/A N/A 4.004±1.92 2.258±0.80 1.976±0.00 N/A 6.567±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082701 ENST00000264235 6.787±0.00 3.767±0.00 2.229±0.00 9.058±1.71 4.789±1.53 3.502±0.64 3.586±2.76 3.392±0.00 2.275±1.04 4.021±1.13 5.050±0.00 3.482±0.84 4.002±0.09 4.235±1.28
ENST00000316626 4.897±0.00 N/A 3.309±0.00 13.161±0.00 8.528±0.00 3.743±1.29 6.603±0.00 3.600±0.00 3.771±0.30 9.549±1.89 4.184±0.00 6.389±3.02 3.723±0.24 11.014±0.45
ENST00000473886 N/A N/A 15.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144852 ENST00000337940 0.006±0.00 0.064±0.00 N/A N/A 0.623±0.00 N/A 0.008±0.00 1.059±1.00 7.751±0.00 0.019±0.00 N/A 0.030±0.00 N/A N/A
ENST00000393716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENST00000466380 N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474090 N/A N/A N/A N/A 2.344±0.00 3.775±0.00 N/A N/A 0.181±0.00 N/A N/A 4.551±0.00 N/A N/A
ENST00000493757 0.007±0.00 0.007±0.00 N/A 0.113±0.00 0.054±0.00 N/A 0.048±0.00 3.216±0.00 7.425±0.00 0.088±0.00 N/A 0.705±0.55 0.025±0.01 0.052±0.02
ENSG00000239835 ENST00000482027 0.023±0.00 0.045±0.00 N/A 0.070±0.00 0.011±0.00 N/A 0.011±0.00 0.367±0.28 N/A N/A N/A N/A N/A N/A
ENSG00000240471 ENST00000493810 N/A 0.024±0.00 N/A N/A N/A 0.205±0.00 N/A 1.557±0.00 0.021±0.00 N/A N/A N/A N/A N/A
ENSG00000241546 ENST00000491262 N/A 0.253±0.00 N/A N/A 0.125±0.00 N/A N/A N/A N/A 2.344±0.00 N/A 1.710±0.00 N/A 0.065±0.03

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