C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glypican 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466624 GPC1-011 ENSG00000063660 9606 + 2:240465527-240466793 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungOvaryPlacentaTestisENST00000466624
Transcript ID Bladder Brain Breast Liver Lung Ovary Placenta Testis
ENST00000466624 0.752±0.00 5.091±0.00 1.453±0.00 2.858±0.00 1.257±0.00 34.039±0.00 53.038±0.00 23.840±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TM CIL_0007TM_0001 VISTA 2:239957940-240560738
CIL_0009AE CIL_0009AE_0001 VISTA 2:240068562-240673577
CIL_0003NP CIL_0003NP_0001 CGP 2:240139026-240468078
CIL_0004UD CIL_0004UD_0002 CGP 2:240435671-240569209

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045970 Gpc1-001 protein_coding Mus_musculus 5e-30 135

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