C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000466698  |
SEMA4A-009 |
ENSG00000196189 |
9606 | + |
1:156160544-156161669  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000898 | CIL_000898_0001 | VISTA | 1:155789635-156392759 |
| CIL_0008P5 | CIL_0008P5_0001 | VISTA | 1:155795688-156399252 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000169222
|
Sema4a-203 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000165898
|
Sema4a-201 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000166237
|
Sema4a-202 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000107531
|
Sema4a-002 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000029700
|
Sema4a-001 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000185137
|
Sema4a-007 | nonsense_mediated_decay | Mus_musculus | 0 | 353 |
|
ENSMUST00000149145
|
Sema4a-014 | retained_intron | Mus_musculus | 0 | 231 |
|
ENSMUST00000135732
|
Sema4a-006 | retained_intron | Mus_musculus | 4.06377e-44 | 182 |
