C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLIS family zinc finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467497 GLIS3-005 ENSG00000107249 9606 - 9:3855437-4118017 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyENST00000467497
Transcript ID Colon Kidney
ENST00000467497 0.471±0.00 0.456±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0001 CGP 9:3824127-4587469

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161026 Glis3-007 retained_intron Mus_musculus 0 1138
ENSMUST00000065113 Glis3-003 nonsense_mediated_decay Mus_musculus 0 1138
ENSMUST00000162022 Glis3-001 protein_coding Mus_musculus 0 1138
ENSMUST00000112612 Glis3-002 protein_coding Mus_musculus 0 628
ENSMUST00000159520 Glis3-008 processed_transcript Mus_musculus 0 518
ENSMUST00000162873 Glis3-009 processed_transcript Mus_musculus 0 453

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