C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase mitochondrial F1 complex assembly factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467560 ATPAF2-011 ENSG00000171953 9606 - 17:18018262-18021264 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleOvaryENST00000467560
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle Ovary
ENST00000467560 3.173±0.00 10.545±0.00 4.865±0.00 7.340±0.00 10.234±0.00 6.722±0.00 6.996±0.00 9.807±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058R CIL_00058R_0002 CGP 17:17843511-18016889
CIL_0000DY CIL_0000DY_0001 CGP 17:17972813-18039209
CIL_0000DZ CIL_0000DZ_0001 CGP 17:17977409-18068404

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108721 Atpaf2-001 protein_coding Mus_musculus 0 318
ENSMUST00000145532 Atpaf2-005 nonsense_mediated_decay Mus_musculus 0 246

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