C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mutS homolog 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468136 MSH5-022 ENSG00000204410 9606 + 6:31753283-31759501 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000468136
Transcript ID Kidney Ovary Placenta Testis
ENST00000468136 0.992±0.00 12.098±0.00 3.724±0.00 15.182±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172536 Msh5-005 nonsense_mediated_decay Mus_musculus 0 782
ENSMUST00000097338 Msh5-008 protein_coding Mus_musculus 0 782
ENSMUST00000007250 Msh5-001 protein_coding Mus_musculus 0 782
ENSMUST00000174603 Msh5-007 nonsense_mediated_decay Mus_musculus 0 717
ENSMUST00000174556 Msh5-004 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000174026 Msh5-003 nonsense_mediated_decay Mus_musculus 0 193

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