C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like (endophilin) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468286 SGIP1-007 ENSG00000118473 9606 + 1:66534156-66677096 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungMuscleOvaryTestisENST00000468286
Transcript ID Bladder Brain Breast Lung Muscle Ovary Testis
ENST00000468286 1.874±0.00 13.059±0.00 3.373±0.00 3.338±0.00 0.267±0.00 0.706±0.06 2.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NS CIL_0002NS_0001 CGP 1:65792514-66748299
CIL_000262 CIL_000262_0001 CGP 1:66533383-66778787

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106882 Sgip1-007 protein_coding Mus_musculus 0 606
ENSMUST00000080728 Sgip1-004 protein_coding Mus_musculus 0 606
ENSMUST00000072481 Sgip1-006 protein_coding Mus_musculus 0 606
ENSMUST00000066824 Sgip1-001 protein_coding Mus_musculus 0 606
ENSMUST00000183855 Sgip1-002 nonsense_mediated_decay Mus_musculus 0 560
ENSMUST00000156596 Sgip1-011 protein_coding Mus_musculus 0 531
ENSMUST00000149547 Sgip1-005 protein_coding Mus_musculus 0 516
ENSMUST00000142430 Sgip1-003 processed_transcript Mus_musculus 0 379
ENSMUST00000097948 Sgip1-012 protein_coding Mus_musculus 0 379
ENSMUST00000136164 Sgip1-008 processed_transcript Mus_musculus 0 361
ENSMUST00000137592 Sgip1-009 processed_transcript Mus_musculus 0 361
ENSMUST00000140289 Sgip1-010 processed_transcript Mus_musculus 0 226

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