C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon family AMPA receptor auxiliary protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468318 CNIH4-003 ENSG00000143771 9606 + 1:224356888-224376884 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000468318
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000468318 1.596±0.88 1.806±0.01 3.339±1.04 1.805±0.00 3.442±2.30 1.701±0.41 2.192±0.00 1.632±0.00 2.113±0.60 4.185±1.20 2.138±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0001 VISTA 1:224201914-224806293
CIL_0005S3 CIL_0005S3_0001 CGP 1:224227334-224379459
CIL_0000C0 CIL_0000C0_0002 CGP 1:224356850-224437033

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134115 Cnih4-001 protein_coding Mus_musculus 0 534
ENSMUST00000075968 Cnih4-002 processed_transcript Mus_musculus 0 497
ENSMUST00000111057 Cnih4-003 retained_intron Mus_musculus 0 464
ENSMUST00000111059 Cnih4-004 protein_coding Mus_musculus 0 254

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