C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468627 RP11-12N13.1-001 ENSG00000244429 9606 + 3:166293756-166294353 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastTestisENST00000468627
Transcript ID Brain Breast Testis
ENST00000468627 0.016±0.00 0.016±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZD CIL_0001ZD_0001 CGP 3:165772904-167381346

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166411 Ssb-201 protein_coding Mus_musculus 0 274
ENSMUST00000112260 Ssb-003 protein_coding Mus_musculus 0 274
ENSMUST00000132186 Ssb-002 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000090852 Ssb-001 protein_coding Mus_musculus 0 274
ENSMUST00000156057 Ssb-004 processed_transcript Mus_musculus 0 268

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