| Transcript ID | Ovary |
|---|---|
| ENSMUST00000166411 | 0.560±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Sjogren syndrome antigen B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000166411  |
Ssb-201 |
ENSMUSG00000068882 |
10090 | + |
2:69861562-69871846  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007VY | CIL_0007VY_0002 | VISTA | 2:69698509-70299848 |
| CIL_0004SC | CIL_0004SC_0002 | CGP | 2:69821944-69871846 |
| CIL_0004SJ | CIL_0004SJ_0002 | CGP | 2:69861562-69885615 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003723 | IDA | RNA binding |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006396 | IEA | RNA processing |
| GO:0030529 | IEA | ribonucleoprotein complex |
| GO:0044822 | IEA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000260956
|
SSB-001 | protein_coding | Homo_sapiens | 0 | 1182 |
|
ENST00000409333
|
SSB-003 | protein_coding | Homo_sapiens | 0 | 1175 |
|
ENST00000410097
|
METTL5-004 | protein_coding | Homo_sapiens | 0 | 207 |
|
ENST00000413002
|
SSB-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 479 |
|
ENST00000414531
|
RP11-382H24.2-001 | processed_pseudogene | Homo_sapiens | 0 | 806 |
|
ENST00000417292
|
SSB-005 | protein_coding | Homo_sapiens | 0 | 547 |
|
ENST00000420252
|
AC013470.6-001 | processed_pseudogene | Homo_sapiens | 0 | 1035 |
|
ENST00000422006
|
SSB-004 | protein_coding | Homo_sapiens | 0 | 701 |
|
ENST00000438469
|
RP11-325P15.2-001 | processed_pseudogene | Homo_sapiens | 0 | 961 |
|
ENST00000455793
|
RP11-3D23.1-001 | processed_pseudogene | Homo_sapiens | 0 | 682 |
|
ENST00000461708
|
SSB-007 | retained_intron | Homo_sapiens | 0 | 479 |
|
ENST00000468600
|
SSB-008 | retained_intron | Homo_sapiens | 0 | 248 |
|
ENST00000468627
|
RP11-12N13.1-001 | processed_pseudogene | Homo_sapiens | 0 | 274 |
|
ENST00000470621
|
SSB-013 | retained_intron | Homo_sapiens | 0 | 276 |
|
ENST00000474273
|
SSB-009 | retained_intron | Homo_sapiens | 0 | 359 |
|
ENST00000490914
|
SSB-011 | retained_intron | Homo_sapiens | 0 | 387 |
|
ENST00000494051
|
SSB-012 | retained_intron | Homo_sapiens | 0 | 206 |
