C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: presenilin associated, rhomboid-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469056 PARL-003 ENSG00000175193 9606 - 3:183862607-183884933 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000469056
Transcript ID Kidney
ENST00000469056 1.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G0 CIL_0005G0_0001 CGP 3:183815876-183884933

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136252 Parl-002 nonsense_mediated_decay Mus_musculus 0 582
ENSMUST00000133153 Parl-009 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000136700 Parl-005 processed_transcript Mus_musculus 0 484
ENSMUST00000048642 Parl-001 protein_coding Mus_musculus 0 484
ENSMUST00000120117 Gm13181-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000143648 Parl-006 retained_intron Mus_musculus 0 440
ENSMUST00000123070 Parl-003 retained_intron Mus_musculus 0 398
ENSMUST00000152887 Parl-004 processed_transcript Mus_musculus 0 390
ENSMUST00000153275 Parl-010 retained_intron Mus_musculus 0 213
ENSMUST00000117482 Gm14994-001 processed_pseudogene Mus_musculus 1.4013e-45 187

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