C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: presenilin associated, rhomboid-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136252 Parl-002 ENSMUSG00000033918 10090 - 16:20279820-20302345 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENSMUST00000136252
Transcript ID Muscle Testis
ENSMUST00000136252 2.037±0.00 5.758±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G0 CIL_0005G0_0002 CGP 16:20233310-20302387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311101 PARL-002 protein_coding Homo_sapiens 0 560
ENST00000317096 PARL-001 protein_coding Homo_sapiens 0 776
ENST00000402907 RP1-95L4.4-001 processed_pseudogene Homo_sapiens 0 636
ENST00000417784 PARL-009 protein_coding Homo_sapiens 0 601
ENST00000418450 PARL-010 protein_coding Homo_sapiens 0 298
ENST00000421484 PARL-004 nonsense_mediated_decay Homo_sapiens 0 1426
ENST00000435888 PARL-007 protein_coding Homo_sapiens 0 544
ENST00000449306 PARL-005 protein_coding Homo_sapiens 0 222
ENST00000450375 PARL-008 protein_coding Homo_sapiens 0 239
ENST00000469056 PARL-003 retained_intron Homo_sapiens 0 582
ENST00000482027 RP11-767L7.1-001 processed_pseudogene Homo_sapiens 0 573
ENST00000488202 PARL-006 retained_intron Homo_sapiens 0 396

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