C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469174 PABPC1P3-001 ENSG00000230673 9606 - X:74583088-74583546 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000469174
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000469174 0.808±0.00 1.235±0.00 0.609±0.45 0.603±0.00 0.249±0.06 0.059±0.00 0.033±0.00 0.132±0.07 0.935±0.00 0.283±0.19 0.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S9 CIL_0006S9_0001 CGP X:74421461-74614617

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146577 Pabpc1-003 processed_transcript Mus_musculus 0 621
ENSMUST00000001809 Pabpc1-001 protein_coding Mus_musculus 0 621
ENSMUST00000162696 Gm16580-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000155116 Pabpc1-007 protein_coding Mus_musculus 0 472
ENSMUST00000147116 Pabpc1-004 processed_transcript Mus_musculus 0 405
ENSMUST00000142357 Pabpc1-005 processed_transcript Mus_musculus 0 305

Loading