C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146577 Pabpc1-003 ENSMUSG00000022283 10090 - 15:36596024-36598312 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281589 PABPC3-001 protein_coding Homo_sapiens 0 689
ENST00000318607 PABPC1-001 protein_coding Homo_sapiens 0 806
ENST00000403786 AC019129.1-001 processed_pseudogene Homo_sapiens 0 339
ENST00000469174 PABPC1P3-001 processed_pseudogene Homo_sapiens 0 621
ENST00000510152 RP11-333E13.2-001 processed_pseudogene Homo_sapiens 0 272
ENST00000517403 PABPC1-007 protein_coding Homo_sapiens 0 244
ENST00000517990 PABPC1-025 protein_coding Homo_sapiens 0 401
ENST00000518293 PABPC1-021 protein_coding Homo_sapiens 0 196
ENST00000518716 PABPC1-022 retained_intron Homo_sapiens 0 189
ENST00000519004 PABPC1-002 protein_coding Homo_sapiens 0 806
ENST00000519848 PABPC1-023 retained_intron Homo_sapiens 0 549
ENST00000520868 PABPC1-006 protein_coding Homo_sapiens 0 726
ENST00000522387 PABPC1-003 protein_coding Homo_sapiens 0 806
ENST00000522658 PABPC1-005 protein_coding Homo_sapiens 0 702
ENST00000523636 PABPC1-014 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000539977 PABPC1P4-001 processed_pseudogene Homo_sapiens 0 492
ENST00000610907 PABPC1-201 protein_coding Homo_sapiens 0 455

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