C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469748 RP11-440K22.1-001 ENSG00000220343 9606 + 3:167065831-167066320 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000469748
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000469748 0.130±0.00 0.577±0.00 0.328±0.00 0.069±0.00 0.095±0.00 0.030±0.00 0.171±0.00 0.417±0.00 0.029±0.00 0.331±0.00 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZD CIL_0001ZD_0001 CGP 3:165772904-167381346

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 577
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 556
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 553
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 532
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 525
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 514
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 492
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 191

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