C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469891 CTD-2287O16.1-001 ENSG00000185641 9606 - 5:116051917-116052289 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000469891
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000469891 0.127±0.00 0.879±0.00 0.131±0.00 0.085±0.00 0.120±0.00 0.042±0.00 0.037±0.00 0.096±0.06 2.257±2.91 0.159±0.02 0.075±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LB CIL_0004LB_0001 CGP 5:115962454-116058928
CIL_0002DV CIL_0002DV_0001 CGP 5:116051466-116412762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119876 Rps25-ps1-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000080300 Rps25-201 protein_coding Mus_musculus 0 436
ENSMUST00000116078 Gm12643-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000072718 Gm4963-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000137940 Gm16288-001 processed_pseudogene Mus_musculus 0 351

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