C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7-like 1 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469911 RPL7L1P8-001 ENSG00000228766 9606 + 3:182610674-182611414 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastENST00000469911
Transcript ID Adipose Adrenal Brain Breast
ENST00000469911 0.018±0.00 0.019±0.00 0.068±0.01 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FX CIL_0005FX_0001 CGP 3:181711924-182921635
CIL_0007U2 CIL_0007U2_0001 VISTA 3:182208439-182810171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 560
ENSMUST00000119005 Gm11222-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 507
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 507

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