C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, beta 4 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470066 CACNB4-007 ENSG00000182389 9606 - 2:151865761-151973720 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartLiverLungOvaryPlacentaENST00000470066
Transcript ID Adipose Adrenal Bladder Breast Heart Liver Lung Ovary Placenta
ENST00000470066 0.026±0.00 0.051±0.00 0.207±0.00 0.118±0.04 0.018±0.00 0.019±0.00 0.213±0.14 0.064±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E4 CIL_0007E4_0001 CGP 2:151788984-152099079
CIL_0007E3 CIL_0007E3_0001 CGP 2:151832776-152175992

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102760 Cacnb4-001 protein_coding Mus_musculus 0 778
ENSMUST00000102761 Cacnb4-003 protein_coding Mus_musculus 0 695
ENSMUST00000078324 Cacnb4-002 protein_coding Mus_musculus 0 688
ENSMUST00000178799 Cacnb4-201 protein_coding Mus_musculus 0 621
ENSDART00000149177 cacnb4b-005 nonsense_mediated_decay Danio_rerio 0 292
ENSDART00000089577 cacnb4b-004 protein_coding Danio_rerio 0 292

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